Yes, So basically the wheel well comes straight out to the rear fender rather than dipping back down to the fender lip like it once did. The paint around the edge gets burn by tack welding it back together. However it gets covered by the fender flare material so you can't tell it has been painted again.
This is also the reason a 2 door was used this time. In order to cut this deep into the fender on a 4 door a person would have to mess with the door.